Index

B

BOOST_INCLUDEDIR BOOST_LIBRARYDIR

Boost_USE_STATIC_LIBS

C

CMAKE_BUILD_TYPE CMAKE_PREFIX_PATH coherent/intermediate scattering function

CUDA_INSTALL_PREFIX CXXFLAGS

H

HALMD_BACKEND_EXECUTABLES HALMD_USE_STATIC_LIBS HALMD_VARIANT_CELL_SUMMATION_ORDER HALMD_VARIANT_FORCE_DSFUN HALMD_VARIANT_HILBERT_ALT_3D

HALMD_VARIANT_HILBERT_ORDER HALMD_VARIANT_HOST_SINGLE_PRECISION HALMD_VARIANT_VERLET_DSFUN HDF5_USE_STATIC_LIBS

I

incoherent/self-intermediate scattering function

L

Lennard-Jones force

Lennard-Jones potential

M

mean kinetic energy per particle mean potential energy per particle mean quartic displacement

mean squared displacement mean total energy per particle

N

NVCCFLAGS

P

particle velocities

periodically extended particle coordinates

S

shifted, truncated Lennard-Jones potential Soft power-law force

Soft power-law potential squared self-intermediate scattering function

T

temperature

time of trajectory snapshots

U

unit of energy unit of length

unit of time

V

velocity auto-correlation function velocity center of mass velocity-Verlet algorithm

virial pressure virial stress